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ISSN 0974-3618
(Print) www.rjptonline.org
0974-360X (Online)
RESEARCH ARTICLE
Purification and Characterization of the
1-Deoxy-D-Xylulose-5-Phosphate Reductoisomerase From Cymbopogon Flexuosus Leaves
Ashish Kumar Gupta and Deepak Ganjewala*
Amity Institute
of Biotechnology, Amity University Uttar Pradesh, Sector 125, Noida-201303, UP,
India
*Corresponding Author E-mail: deepakganjawala73@yahoo.com; dganjewala@amity.edu
ABSTRACT:
Cymbopogon flexuosus known as lemongrass is an
eminent aromatic grass which produces lemon scented essential oils through the
2C-methyl-D-erythritol-4-phosphate (MEP) pathway. In the second step which is
believed to be the first committed step of this pathway, 1-deoxy-D-xylulose-5-phosphate
(DXP) simultaneously undergoes an intra-molecular
rearrangement and reduction by an enzyme 1-deoxy-D-xylulose-5-phosphate
reductoisomerase (DXR) to form 2-C-methyl-D-erythritol-4-phosphate
(MEP). In the present work we have measured the activities of DXR enzyme
accompanying leaf development in C.
flexuosus. Also, the DXR enzyme was purified and characterized and
referred as CfDXR. The CfDXR activities markedly fluctuated
in 1-5th leaf position of one month old tiller which represents gradient
increase in leaf age. The CfDXR
activity was recorded maximal in the 1st and 2nd leaf
position which represents early (immature) developmental stages and declined
rapidly in subsequent leaf positions (3rd-5th). The CfDXR was purified to homogeneity by
three step procedure: ammonium sulfate fractionation, followed by ion-exchange
chromatography on DEAE-cellulose and gel exclusion chromatography using
sephadex G-75. The purified CfDXR
showed a specific activity of 52U/mg protein. It is consists of two identical
polypeptides with Mr of 45 KDa
as detected by SDS-PAGE. The maximum activity (Vmax) of the purified CfDXR with DXP as substrate was 8.56 μM
x min-1 whereas for NADPH 14.99 μM x min-1. The
purified CfDXR had Km = 3.71
μM for the DXP and 5.99 μM for NADPAH as substrates. The optimum
temperature and pH of the CfDXR
was 40-60 C and pH 7.5-8.0,
respectively. The CfDXR
required bivalent cations (Co2+, Mn2+ and Mg2+)
for activity. It showed the highest activity in presence of Co2+ (1
mM) followed by Mn2+ and Mg2+. The enzyme when stored at
4 C in 100mM Tris-HCl buffer (pH 7.5)
for one month, was quite stable retaining more than 80% of the initial
activity.
KEYWORDS: Cymbopogon
flexuosus, citral,
1-deoxy-D-xylulose-5-phosphate reductoisomerase, essential oil,
2C-methyl-D-erythritol-4-phosphate pathway
INTRODUCTION:
The genus Cymbopogon comprising of
aromatic grasses is one of the most important essential oil producing genus
(Khanuja et al., 2005; Ganjewala et al., 2008, Ganjewala, 2009; Ganjewala and
Gupta, 2013). Cymbopogon flexuosus
commonly known as lemongrass is one of the eminent members in this genus which
produce lemon-scented essential oil of high commercial and pharmaceutical
importance (Ganjewala, 2009; Ganjewala and Gupta, 2013). The essential oils of C. flexuosus are comprised of
monoterpenes mainly the acyclic monoterpene aldehyde citral, which accounts for
80-90% of the total monoterpenes (Ganjewala and Gupta, 2013).
Received on 22.01.2015 Modified on 18.02.2015
Accepted on 08.03.2015 © RJPT All right reserved
Research J. Pharm. and Tech.
8(3): Mar., 2015; Page 320-327
DOI: 10.5958/0974-360X.2015.00053.0
Citral is a recemic mixture of geranial
(citral a, E-isomer) and neral (citral b, Z-isomer) that imparts lemon-like
aroma to the essential oils of Cymbopogon sp. (Ganjewala and Gupta, 2013).
Monoterepenes are C10 compounds belong to the isoprenoids family and
derived from geranyl pyrophosphate (GPP). In plants, GPP the universal
precursor of monoterpenes is biosynthesized through the head to tail
condensation of two C5 isoprene units called isopentenyl
pyrophosphate (IPP) and its isomer dimethylallyl pyrophosphate (DMAPP). The IPP
in turn is synthesized via the 2C-methyl-D-erythritol-4-phosphate (MEP) pathway
(Rohmer et al., 1996; Memelink et al., 2001).
In higher plant the MEP pathway operates in
plastidial compartment. The pathway starts with the TPP-dependent condensation
of glyceraldehyde-3-phosphate (GAP) and pyruvate to
1-deoxy-D-xylulose-5-phosphate (DXP), which leads to the formation of the IPP
and DMAPP in the eight subsequent steps (Rohmer et al., 1996; Lange et al.,
1998; Lois et al., 1998). In the second step of the pathway, DXP is
simultaneously undergoing isomerization and reduction to form
2C-methyl-D-erythritol-4-phosphate (MEP) by the enzyme
1-deoxy-D-xylulose-5-phosphate reductoisomerase (DXR) which requires as
cofactor NADPH and bivalent metal ions such as Mn2+, Mg2+
or Co2+ (Kuzuyama et al.,2000; Grolle et al., 2000; Miller et al.,
2000). The DXR-catalyzed step is regarded as the first committed step in the
MEP pathway that is why the DXR is a key enzyme that regulate and controls
biosynthesis of isoprenoids (Veau et al., 2000, Mahmoud and Croteau 2001,
Croteau-Paulet et al., 2002). Already, six of the eight enzymes of the MEP
pathway have been successfully crystallized and structurally characterized from
plants and microorganisms (Proteau, 2004, Cordoba et al., 2009; Quidwai et al.,
2014). The genes encoding enzymes of the MEP pathway from many more plants and
bacteria have been rapidly cloned and characterized. Detail of the genes
encoding enzymes of the MEP pathway from plants have been discussed previously
(Ganjewala et al., 2009). The DXR was first cloned and over expressed in E coli
which catalyzed the formation of MEP from DXP in a single step in the presence
of both NADPH and bivalent cations such as Mg 2+, Mn2 + or
Co2+ (Kuzuyama et al., 2000).
Recently, a gene encoding RvDXR from Rauvolfia verticullata was cloned and
characterized which is 1804bp long containing a 1425bp open reading frame
(ORF), encoding a peptide of 474 AA with molecular mass of 51.3 kDa (Liao et
al.,2007). Previously published reports have revealed that there is a positive
correlation between the DXR activity and the amount of isoprenoids (chlorophyll
and carotenoids) accumulated in transgenic Arabidopsis (Carretero-Paulet et
al., 2006) and monoterpenes levels in transgenic peppermint plants (Mahmoud and
Croteau, 2001).
Despite the immense pharmaceutical and
industrial significance of the Cymbopogon essential oil, till to date very
little no gene encoding enzymes of the MEP pathway has been cloned and
characterized from the Cymbopogon
sp. However, a tremendous progress has been witnessed on cloning and
characterization MEP pathway genes from other plant families like lamiaceae,
pinaceae, rutaceae and others that provided much deeper insight into
biosynthesis and regulation of monoterpenes. The in hand cDNA clone have
greatly facilitated the metabolic engineering of the corresponding pathways to
improve yield and quality of the essential oils in above plant families. Our
recent study in C. flexuosus
using radiolabelled substrate, 1-13C-glucose and fosmidomycin a
potent inhibitor of the DXR followed by quantitative NMR spectroscopy has
revealed that in C. flexuosus citral is biosynthesized via the MEP pathway
(Fig. 1) (communicated) and not by the classical cytosolic acetate-MVA pathway
as was reported previously (Lalitha et al., 1985; Lalitha
and Ramasarma, 1986). Here, we report for the first time the DXR enzyme
activity during leaf development and its isolation and characterization from C.
flexuosus. The DXR enzyme activity
markedly fluctuate during leaf development and was correlated with the amount
of monoterpenes accumulated, thus indicated its regulatory roles in monoterpene
biosynthesis. In future, the gene encoding DXR will be cloned and
characterized from C. flexuosus that may provide deeper insight into
monoterpene biosynthesis and of use in metabolic engineering of the MEP pathway
in Cymbopogon sp. for better
yield and quality of essential oils.

Figure 1. MEP pathway of essential
oil/monoterpene biosynthesis in Cymbopogon flexuosus. GA-3-P,
glyceraldehydes-3-phosphate; DXP, Deoxy-xylulose-5-phosphate; MEP,
2C-methyl-D-erythritol-4-phosphate; IPP, isopentenyl diphosphate; GPP,
geranylpyrophosphate; G, geraniol; GA, geranyl acetate; C, citral; EO,
essential oil. Enzymes: DXS, 1-Deoxy-xylulose-5-phosphate synthase; CfDXR,
Cymbopogon flexuosus 1-Deoxy-xylulose-5-phosphate reductoisomerase; GPPase,
geranylpyrophosphatase; GES; geraniol synthase; GAE, geranyl acetate esterase;
GDH, geraniol dehydrogenase. TPP, thiamine pyrophosphate; NADPH, nicotinamide
adenine dinucleotide phosphate (reduced).
MATERIALS AND METHODS:
Plant material:
Cymbopogon flexuosus cultivar Suvarna plants were grown in the
Organic Farm House of the Amity University Uttar Pradesh, Noida, India. The
plants were allowed to grow till they are fully expanded (45-50 days). The
fully grown tillers were harvested; leaves from tillers were separated
according to their position in the tiller from inside to out side. The 1st
(innermost) leaf position represents the youngest leaf stage whereas the 5th
(outermost) leaf stage represented fully matured/expanded stage. In the present
study, we used immature (2nd) leaves of the tiller for isolation of
the DXR enzyme.
Chemicals:
Deoxy-xylulose-5-phosphate
(DXP), MgCl2, CoCl2, MnCl2, Tris-base, EDTA, 2-mercaptoethanol, ascorbic acid,
sucrose, Sephadex G-75, DEAE Cellulose, Polyvinylpyrrolidone (PVPP) and other standard chemicals were
purchased from Sigma-Aldrich, Germany
Extraction of DXR:
The
DXR was extracted using 50 mM Tris-HCl
buffer (pH 7.5) containing sodium metabisulfite
(20 mM), 2-mercaptoethanol (10 mM), ascorbic acid (10
mM), sucrose (0.15 M),
phenylmethylsulfonyl fluoride (1 mM) and EDTA (1 mM
). Leaf tissues (1 gm) were grounded
with extraction buffer (1:4 w/v) in presence of insoluble polyvinylpyrrolidone (PVPP) (50% w/w). The
homogenate was squeezed through four
layers of muslin cloth and
centrifuged at 12,000 × g for 50 min
at 4 ºC. The
clear transparent supernatant was collected in graduated tubes and used
for determination of the DXR activity. Total protein in crude enzymatic extract was
quantified by the Bradford method (Bradford, 1976)
DXR assay:
The
DXR assay was performed according to previously published report (Mac Sweeney et al., 2005; Grolle et al., 2000;
Ramak et al., 2013). The DXR activity was analyzed based on the decrease in A340
signal resulted from oxidation of NADPH. The assay mixture was consisted of
50-mM Tris–HCl (pH 7.5) buffer, substrate DXP (1 mM), cofactor NADPH (1 mM) and
metal ions (MgCl2, MnCl2 and CoCl2 2-4 mM) and
incubated at 40 ºC for 5 min. The reaction was initiated by adding DXR enzyme
to the assay mixture. The oxidation of NADPH was monitored with a UV-VIS spectrophotometer (Shimadzu UV-160) equipped with a
cell holder adjusted at 40 °C at 340 nm for 3 min. One unit of DXR activity is defined as the amount of
the enzyme that caused oxidation of 1 μmol of NADPH per min. Enzyme
activity was expressed as nkatal x min-1 x mg protein-1. The
molar extinction coefficient values for NADPH at 340 nm is 6220 M-1cm-1.
Purification of
DXR enzyme:
A three step procedure was used for the purification of DXR enzyme.
Unless otherwise indicated, all purification procedures were performed at 4 ºC.
In the first step, the enzymic extract prepared from the immature leaves was
fractionated by ammonium sulfate ((NH4)2SO4)
precipitation as
0-30 %, 30-60 % and 60-90% saturation. Proteins precipitating at all the (NH4)2SO4
saturation steps were collected by centrifugation at 13,000xg for 15 min, resuspended in
extraction buffer (50mM Tris-HCl buffer, pH 7.5) and proceed to dialysis. Salting out
was done using dialysis bags (Himedia; AV width-42.44nm, AV diameter-25.4 mm,
Capacity-5.07 ml/cm) as per molecular weight cut off (MWCO) size of the
membrane (25 kDa; 25000 D) against three changes of the same extraction buffer
system. The dialyzed sample was applied to activated and pre-equilibrated
(Tris-HCl 10 mM, pH 7.5). DEAE cellulose matrix packed in a column (Borosil,
200 x 10 mm column). Elution was monitored spectrophotometrically at 280 nm.
The fractions (2 ml each) were collected by washing the matrix with Tris-HCl
buffer (10 mM, pH 7.5). Thereafter, the column was eluted by salt step gradient
method, using increasing concentration of NaCl (50 mM, 100 mM, 200 mM, 300 mM,
400 mM) in Tris-HCl buffer (10 mM, pH 7.5). Thirty peaks were obtained and
fractions corresponding to the peaks were pooled and assayed. Pool 4 from ion
exchange chromatography with highest DXR activity was loaded on to pre-washed
pre-equilibrated Sephadex G-75 matrix. The column was eluted by isocratic
method using Tris-HCl 10 mM, pH 7.5. Twelve fractions of 1 ml each were
collected and assayed for DXR activity and protein content. The fractions
corresponding to the peaks were pooled and the activity was determined as
described above.
Analysis
of proteins by SDS-PAGE:
The
purified protein was resolved by SDS-PAGE according to Laemmli (1971) using a
12% polyacrylamide gel of 1 mm thickness at constant current of 15 mA. Proteins
were visualized by staining of the gel with Coomassie Brilliant Blue R-250. The
molecular mass of the protein bands were determined by comparison with the
standard molecular marker set (Merck).
Effects of
Substrate concentration:
The
optimum substrate (DXP) concentration required for the maximum activity of the
DXR was determined in terms of Vmax
and Michaelis constant Km.
The rate (V0) of the DXR catalyzed reaction was measured using
different concentrations of DXP and NADPH ranging from 3 to 15 x 10-6 moles/L.
The Vmax and
Km values were determined from
the double reciprocal (Line weaver-Burk) plot.
Effects of
temperature and Ph:
The
temperature and pH optima were determined by performing the enzymatic reaction
at different temperatures ranged 0 to100 °C and pH 6 to 9.
Effect
of Metal Ions:
Effect of various metals ions (MgCl2, CoCl2, MnCl2,
CuCl2, CaCl2 and ZnCl2) were on the activity
of the DXR enzyme was evaluated. The enzymatic reaction was performed in
presence of each of the metal ions using a similar concentration of 1 mM on DXR
enzyme were determined. Effective metals as cofactors MgCl2, MnCl2
and CoCl2 different concentrations were checked for optimum
DXR enzyme assay. The DXR enzyme activity was analyzed by as per described.
RESULTS AND DISCUSSION:
Effects of leaf
age on DXR activity, Chlorophyll, carotenoid and essential oil content:
To study the developmental changes in the
DXR activity, enzymic extracts were prepared from the leaves at 1st
to 5th position of a one month old C. flexuosus cv. Suvarna tillers. As mentioned above, leaves in
a tiller from inside to outside represent a gradient increase in leaf age, the
1st being the youngest and the outermost fully matured. The results
showed that the activity of the DXR expressed as nkatal x mg protein-1
was maximal in the initial (1-2nd) leaf positions then rapidly
declined thereafter (Table 1). Chlorophylls and carotenoids content (mg/gFW)
were maximal in immature leaves (1st – 3rd) which
decreased thereafter (Table 1).
Similarly, the essential oil yield was markedly fluctuated during 1st
-5th leaf positions with maximum value of yield (mg/10 leaves and %V
/FW) during the initial (1st -3rd) leaf positions then
declined rapidly in the subsequent leaf positions (Table 1). Thus, immature leaves (1st and 2nd)
are biogenetically most active in the synthesis and accumulation of essential
oil. Our previous studies in C.
flexuosus using [2-14C] acetate also revealed that the rate
of essential oil biosynthesis was maximal during initial stages of leaf
development when leaves are rapidly expanding (Ganjewala et al., 2007a,b;
2008).The higher rate of biosynthesis and accumulation of essential oil could
be correlated with higher expression of genes of the MEP pathway that supply
precursors for the monoterpene biosynthesis (Vallabhaneni
and Wurtzel, 2009; Ruiz-Sola and Rodríguez-Concepción, 2012). The
highest activity of DXR observed here in the initial phase of leaf development
is most likely to provide precursors IPP/DMAPP for the isoprenoids including
monoterpenes (essential oil) biosynthesis. Previous studies on the cloning and
over expression of the DXR gene in plants such as spike lavender
(Munoz-Bertomeu et al., 2006), Rauvolfia
verticillata (Liao et al., 2007), transgenic peppermint (Mamoud and
Croteau, 2001) Arabidopsis (Carretero-Paulet et al., 2006) and transplastomic
tobacco (Hasunuma et al., 2008) have revealed a correlation between the DXR
expression and enhanced essential oil/monoterpene/isoprenoids contents. The
expression pattern/level of the DXR enzyme varied with the tissue type and its
developmental stages (Liao et al., 2006). Thus the variation seen in the DXR
enzyme activity in C. flexuosus
is consistent with previous reports. However more detail study is required to
confirm the correlation between DXR activity and chlorophyll and carotenoid
content.
Table 1. Effects
of leaf age on CfDXR activity, essential oil yield, chlorophyll and carotenoids
contents in C. flexuosus cv. Suvarna.
|
Leaf position |
CfDXR activity nkatal x mg protein-1 |
Essential oil yield |
Chlorophyll (mg x FW-1) |
Carotenoids |
|||
|
mg x 10 leaves-1 |
%V /FW |
Chl. a (mg x FW-1) |
Chl. B (mg x FW-1) |
Chl. a+b (mg x FW-1) |
(mg x FW-1) |
||
|
I |
12.96 |
41.0 |
0.92 |
0.50 |
0.24 |
0.74 |
1.69 |
|
II |
13.09 |
101.0 |
1.10 |
0.47 |
0.47 |
0.94 |
1.62 |
|
III |
10.34 |
100.5 |
0.99 |
0.50 |
0.23 |
0.73 |
1.61 |
|
IV |
8.65 |
61.0 |
0.59 |
0.32 |
0.24 |
0.56 |
1.46 |
|
V |
7.05 |
52.0 |
0.55 |
0.26 |
0.24 |
0.50 |
1.23 |
Purification and characterization of DXR
The DXR was purified following a three step
procedure designed according to the previously published reports. Results of
the purification procedure are summarized in Table 2. In the first step,
the crude enzyme extract was subjected to precipitation by using ammonium
sulfate fractionation followed by dialysis. The results showed that about 60 %
of the DXR activity precipitated between 0-30% (NH4)2SO4
saturation with an increase of 1.5 fold purification as compared to the crude
extract. Thus obtained enzymatic fraction of DXR was dialyzed using the buffer
(50 mM Tris HCl, pH 7.5) which was used for extraction of the enzyme. By the
end of this combined procedure, the specific activity of the partially purified
DXR measured was 15 nkatal /mg which were relatively higher than 11 nkatal / mg
of the crude enzyme. The purified DXR fractions were stored at 4 ºC for the
further purification steps. In the second step, the enzyme was purified by ion
exchange chromatography on DEAE cellulose column pre-equilibrated with 10 mM
Tris-HCl buffer, pH 7.5. The column was eluted by salt step gradient method,
using increasing concentrations of NaCl (50-400 mM) in the same buffer. Elution
profiles are depicted in Fig. 2.
Prominent peaks with maximum DXR activity were recorded in pool 4 comprising of
fractions 34-42. The ion exchange chromatography resulted in a significant
increase in the specific activity of the DXR which went up to 27.83 nkatal /mg
from the previous value of 15 nkatal /mg indicating an almost 2.3 % fold
increase in purification fold. In the third or final steps of purification,
activated concentrated sample dissolved in 10 mM Tris-HCl buffer was subject to
gel filtration chromatography on a Sephadex G-75 column (200 x 10 mm). The column was equilibrated and eluted with
the same (Fig. 3). The DXR activity was found in the fractions 6-8. The
purified CfDXR
showed specific activity 52 nkatal /mg protein with a final 4.8 % fold
increases in purification fold. Homogeneity of the DXR containing fraction was
evaluated by SDS-PAGE. Single band corresponding to the 45.0 kDa was detected
in the gel electrophoretogram which was identified as CfDXR (Fig. 4). The Mr of the CfDXR) has been consisting with the Mr of DXRs reported previously.
Table 2. Summary
of purification steps of DXR enzyme of C.
flexuosus cv. Suvarna
|
Purification Steps |
Vol. of Fraction (ml) |
Protein |
Enzyme |
|||||
|
mg x ml-1 |
Total (mg) |
nkatal x ml-1 |
Specific activity (nkatal x mg protein-1) |
Total (nkatal) |
Yield (%) |
Purification fold |
||
|
Crude extract |
20 |
1.17 |
23.52 |
12.86 |
10.99 |
257.2 |
100 |
1.00 |
|
0-30 % (NH4)2SO4
+dialysis |
10 |
1.05 |
10.5 |
15.54 |
14.80 |
155.4 |
60.41 |
1.34 |
|
DEAE-Cellulose |
5.8 |
0.91 |
5.27 |
25.33 |
27.83 |
146.9 |
57.12 |
2.53 |
|
Sephadex G-75 |
2.2 |
0.59 |
1.29 |
30.66 |
51.96 |
67.44 |
26.22 |
4.72 |
|
Figure 2. Ion exchange
chromatogram (DEAE-Cellulose column, 200 mm length ×10 mm diameter) of the active fractions received from 0-30 % ammonium
sulfate saturation after the dialysis step. The column was equilibrated with
10 mM Tris HCl buffer, pH 7.5, and eluted with a linear NaCl gradient (50
mM-400 mM). |
Figure 3. Elution
profile of the CfDXR enzyme on Sephadex G-75 (200 mm length ×10 diameter) chromatography. The column was eluted by
isocratic method using Tris-HCl 10 mM, pH 7.5. |
|
Figure 4. SDS-PAGE
analysis of CfDXR enzyme. Lane 1, protein marker with the indicated molecular
masses; lane 2, crude enzyme extract; lane 3, ammonium sulfate precipitated
sample; lane 4, DEAE- Cellulose; lane 5, Sephadex G-75 purified CfDXR |
|
The DXRs from microbes and plant are
reported to be a homodimer consisted of two unimolecular and identical
polypeptides of 42-45 KDa monomers. The DXR catalyzes the conversion of DXP
into MEP in presence of the cofactor NADPH and bivalent cations (Mg2+,
Mn2+ or Co2+). Here we optimized concentrations of the
substrate (DXP), cofactor (NADPH) and metal ions (Mg2+, Mn2+
or Co2+) and determined the kinetic parameters, viz., Km and Vmax
for the CfDXR
The Km (DXP) and Km (NADPH) determined for the CfDXR were
62.0 and 100.0 nkatal, respectively (Fig. 5 a, b). The pH and temperature
optima required for the CfDXR were determined by monitoring the DXR activity at
different pH (6-9) and temperature (20-100 ºC). The CfDXR showed highest activity at pH 7.5-8.0
and temperature 40º C (Fig. 5 c, d). Even at 60 ºC CfDXR had 85 % of the maximum activity.
The pH and temperature optima determined for the CfDXR are consistent with the results
of previously published reports (Kuzuyama et al., 2000). However, the CfDXR is
relatively less heat stable than the first characterized E. coli DXR which is reported to be stable even
at 80 º C (Kuzyama et al., 2000). The CfDXR has been found to be more similar to
DXRs from Zymomonas mobilis reported to be stable at 50-60 º C.
|
(a) |
(b) |
|
(c) |
|
Figure 5. Effects
of (a) substrate DXP; (b) cofactor NADPH concentrations; (c) pH and (d)
temperature on CfDXR activity.
The CfDXR also requires bivalent metal for catalyzing
the conversion of DXP to MEP. Here we evaluated effects of several bivalent
metal ions viz., Co2+,
Mn2+ , Mg2+, Cu2+ , Fe2+ , Ca2+
and Zn2+ on the activity of the CfDXR. The results showed that these
bivalent cations greatly influence the activity of DXR (Fig. 6). Almost a 10
fold increase in the CfDXR activity was recorded in presence of the Co2+
(1 mM) followed by Mn2+ , Mg2+ and Cu2+.
However the metal ions Fe2+, Ca2+ and Zn2+ did
not show any effect on CfDXR activity. Maximal activity of the CfDXR was observed in presence of 2 and 4 mM concentrations of
Co2+, Mn2+ and Mg2+. All the
previous reports of isolation and characterization of the DXR enzyme bacteria,
plants and a malaria parasite (Grolle et al., 2000; Miller et al., 2000; Veau
et al., 2000; Altincicek et al., 2000; Yin et al., 2003; Hans et al., 2004)
have revealed that they are homodimers of two identical polypeptides of the
molecular weights of 42-45 kDa. Further, they require the cofactor NADPH and
bivalent metal ions viz., Mn2+,
Mg2+ or Co2+ to catalyze the conversion of the substrate
DXP into MEP.

Figure 6. Effects
of bivalent cations on CfDXR activity. Similar concentration (1 mM) of each
metal was used in the enzyme assay.
The kinetic characterization of the DXR has
shown that the Km (DXP) values vary from 2-720 μM depending on
the source of enzyme whereas Km (NADPH) from 0.5 to 190 μM. In
the present study, the CfDXR
had normal Km values for DXP and NADPH of 3.71 and 5.99 μM , respectively. However, the CfDXR has been found to be quite
different from other DXRs in metal ion requirement. The CfDXR preferred Co2+ over the other metal ions used.
Other characteristic of the CfDXR
like stability, pH and temperature optima were almost identical to the
previously reported DXRs.
ACKNOWLEDGEMENTS:
I would like to thank Council of
Scientific and Industrial Research (CSIR), New Delhi, Government of India for
financing our research programme and Senior Research Fellowship to Mr. Ashish
Kumar Gupta (Grant No. 1235/EMR-II/2010). I duly acknowledge technical support
from AIRF, JNU, New Delhi. Finally, I
would like to thank Amity Institute of Biotechnology, Amity University, Noida
for providing necessary facilities.
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